I finished the install Monday evening, and rode the bike to work and home Tuesday. Performance was perfectly normal except for the multiple keying required to get it to precharge, as expected. It was buttoned up for 24 hours. I had just ridden the bike home not ten minutes before, and keyed it on to check the battery voltage on the Zero app, in order to calibrate the Diginow app literally seconds before, so it was fully precharged.
My mistake was in keying the bike off before starting the Diginow. I read through the installation manual and user guide, but I was still under the impression the Diginow charger would manage the main contactor. I just plain missed the fact that the bike must be keyed on (or the onboard charger started) to close the contactor. Brandon tells me the SC tests to see if the contactor is closed before applying charging current, but it takes a minute or so for the pre-charge to bleed off to the point where the SC can realize the contactor isn't closed. I keyed the bike off and turned on the SC too quickly, fooling the SC into thinking the contactor was closed. It applied charging current with the contactor open, so instead of going into the battery, the charging current went wherever it could...probably the BMS or MBB.
Currently, the bike won't charge with either charger, nor will it go, which tells me it isn't the fuse. When I key the bike on, the dashboard comes alive and performs its normal bootup sequence, but there is no contactor click, no matter how many times I cycle the key. There is also no click when I plug in the onboard charger, though the dashboard does come alive as when charging normally. I was thinking that meant the contactor had blown, but on further thought, I can't see how that would happen. It seems more likely that the BMS or the MBB is shot.
Brandon said he'd come down and help me out, hopefully this Saturday, and I very much appreciate that. He's going to check my installation and help me troubleshoot the bike. Hopefully he can help me get back on the road, and charging. That kind of commitment you don't see from too many manufacturers. I also intend to pick his brain to understand the whole process better, and see if we can't brainstorm some ideas to make it even less likely that anybody else can do what I did.