Align it with the rear axle nut hand-tight so there's a hairline gap between the belt edge and the sprocket guide wall and then torque the rear axle nut to spec; if I recall correctly, like it was on the S/DS, the FX will also nudge towards the center-line of the sprocket when the rear axle nut is tightened. .....
On my 2016 DSR (viewed from behind) I found that the belt travels left towards the sheave (sprocket) lip upon tightening so start out with the belt on the right side edge.
Here are my notes on belt adjustments (2016/thin belt).
2016 DSR (thin belt) 20/30kg tension (using Krikit belt tension gauge).
Jacking left screw(bolt) out (adding tension) moves the belt to the right on the rear sheave/sprocket.
NOTE: Position belt with a right side bias as it will shift to the left when the axle bolt is tightened.
This movement to the left is approx 1/16”-1/8” on my bike (yours might vary).
After making an adjustment to a jack screw, must pry right side of wheel forward (or smack it to the right from the back side) to “set” the adjustment as the belt tension on the sheave will pivot the axle ClockWise...........
(In my opinion, the right jack screw SHOULD be located 180° & push the axle CCW thus countering the Left jack screw CW effect on the Sheave/Belt/Axle. )
NOTE: 1/6 turn of Left jack screw causes a 10KG difference to belt tension.
Best to get the belt/sheave alignment sorted first, then go for proper tension.
I shoot for the greatest tension (30kg).
If you don’t have the correct Metric socket (like me), use a 1-1/16” to tension the axle nut to 102NM (75#’).
Recommend first removing the jack bolts & grinding or filing off the markings so it’s smooth & will not gouge the soft aluminum swing arm.
Put a dab of Anti-seize or heavy grease on the jack bolt threads while your at it.